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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939107.1_cds_XP_016483795.1_74876
CDS Infomation

[gene=LOC107804419] [db_xref=GeneID:107804419] [protein=NADP-dependent malic enzyme, chloroplastic-like] [protein_id=XP_016483795.1] [location=join(3693..3980,4532..4806,5684..5804,5888..5962,6209..6360,6453..6558,6734..6799,7812..7907,8003..8074,8157..8240,8372..8470,9063..9110,9229..9282,9377..9475,9581..9670,9783..9860,9991..10065,10188..10278,10961..11089,11182..11270)] [gbkey=CDS]
Sequence

ATGAAAGGAACAAAATGTTATTACAGTGAAAAATTGGAAGGTCGCAAATGTCCATATCGG
TTGAGCTACAAATGTCCTGATAAATTGCAGAATTGCGTGGACAAAGTATTAGGAGAGAGA
GAGGAAGAGGAAGAAGAAGAAGAGAGAGAGAGAGCAGATCCACAAGAAAAACCCCTCACT
CTCTCTTCTTTCTTTTCTCAATCCTCACTTCATTTCACAGCTAAACAAAAAGACTCTTAT
CTTTATACTTTTTTCACCATGTTCTCCTTGAACGGAAGCAGTTTTACGAACAATTCCCTA
TCTGGGGTTTCAAGATGTTTGACTCAGTCAAGCAGAAGAGGAGTTTCAGGTCCTATGGTA
GTAGCAGCAGCTGTGAATTCAAATGGTAAACCAGGAGACAGAAATGTGAGTGTTTTGGTG
GAGAATTCTATGAAGGAAAGTGCTGCTGCGCCGGTAGAGAAGGAGATTAAATCTACTGTG
ACAGGTGGAGTTGGTGATGTTTATGGTGAGGATAGTGCCACTGAAGATCAGTCCATCACC
CCTTGGACTCTCTCTGTTGCTAGTGGTTACTCATTGTTGCGTAATCCACACTACAACAAA
GGGCTTGCTTTCAGTGAGAAAGAGAGAGATTCCCACTACTTGCGTGGTCTTCTTCCTCCG
GTCGTTGTTAACCATGACCTTCAGGTCAAGAAAATGATGAACAATCTCCGTCAGTATGAG
GTACCACTGCAAAGATACATAGCCATGATGGATATTCAGGAGATGAATGAAAGGCTTTAC
TACAAGCTTCTTATGGACAATGTTGAGGAGCTGCTTCCTATAGTTTACACTCCAACTGTA
GGTGAAGCATGCCAGAAATATGGCAGCATCTTCAGGCGTCCTCAAGGTCTTTTTATCAGC
TTGAAAGAAAAAGGCAAAATTAATGAGGTATTAAAAAATTGGCCTGAGAGGAAAATTCAA
GTTATTGTTGTTACTGATGGAGAACGAATTCTGGGCCTTGGTGACCTTGGTTGCCAGGGA
ATGGGGATTCCAGTAGGCAAGCTCTCTTTATACACTGCTCTGGGAGGCATTCGTCCATCA
GCTTGCTTGCCCATTACCATTGATGTGGGTACAAACAACGAGGATTTGTTGAACGATGAA
TTTTACATTGGACTCAGGCAAAGAAGAGCTAGAGGACAGGAATATGCCGAACTTTTTGAT
GAATTTATGTATGCTGTCAAGCAGAATTATGGGGAGAAAGTGCTCATTCAGTTTGAAGAC
TTTGCAAATCATAATGCATTTGACCTCCTTGCAAAATACGGAACTAGCCACCTTGTTTTC
AATGATGACATACAGGGAACGGCATCTGTGGTCCTCGCAGGGCTCATGGCATCATTGCAA
TTGGTTGGAGGAACCTTGGCTGAACATACATTCTTATTCCTTGGAGCAGGGGAGGCTGGA
ACAGGTATAGCAGAACTCATAGCTCTTGAAATGTCAAAGCAGACTGGAATCCCTCTGGAA
GAGACTCGTAAGAAAATTTGGATGTTGGATTCTAAGGGGCTGATTGTTAATTCTCGCATG
GAGTCGCTTCAACATTTTAAGAGGCCCTGGGCACATGAACACGAACCAGTAAAAGAACTG
GTGAATGCTGTCAAGTCAATTAAGCCAACAGTTTTGATTGGGTCTTCTGGAGCTGGGAGA
ACATTTACTAAAGAAGTTGTACAAGCTATGGCAACATTCAATGAGAAACCAATTATTTTT
GCCCTCTCCAATCCAACGTCACAGTCTGAATGTACTGCTGAAGAAGCTTATTCCTGGAGT
GAGGGGCGGGCCATTTTTGCTAGCGGGAGTCCATTTGCCCCAGTTGAGTACAATGGGAAG
GTCTACGCGTCCGGTCAGGCAAATAATGCATATATCTTCCCTGGGTTTGGTTTAGGACTG
ATAATTTCCGGTGCAATTCGTGTCCACGATGACATGCTCCTGGCAGCCTCGGAAGCTTTA
GCGGAGCAGGTTAGTCAAGAGAACTTTGAGAAGGGGCTCATATACCCGCCATTTACCAAC
ATAAGAAAGATTTCAGCCAACATTGCTGCCAAAGTAGCAGCTAAGGCATATGAACTAGGT
TTGGCCACTCGTCTACCAGAACCTGCGAACCTAGTAGCATATGCAGAGAGCTGTATGTAC
AGCCCCGCTTACCGCAGCTATCGTTGA

Peptide Sequence

PEP ID

XP_016483795.1
PEP Infomation

PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Nicotiana tabacum]
Sequence

MKGTKCYYSEKLEGRKCPYRLSYKCPDKLQNCVDKVLGEREEEEEEEERERADPQEKPLT
LSSFFSQSSLHFTAKQKDSYLYTFFTMFSLNGSSFTNNSLSGVSRCLTQSSRRGVSGPMV
VAAAVNSNGKPGDRNVSVLVENSMKESAAAPVEKEIKSTVTGGVGDVYGEDSATEDQSIT
PWTLSVASGYSLLRNPHYNKGLAFSEKERDSHYLRGLLPPVVVNHDLQVKKMMNNLRQYE
VPLQRYIAMMDIQEMNERLYYKLLMDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLFIS
LKEKGKINEVLKNWPERKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPS
ACLPITIDVGTNNEDLLNDEFYIGLRQRRARGQEYAELFDEFMYAVKQNYGEKVLIQFED
FANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMASLQLVGGTLAEHTFLFLGAGEAG
TGIAELIALEMSKQTGIPLEETRKKIWMLDSKGLIVNSRMESLQHFKRPWAHEHEPVKEL
VNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWS
EGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAL
AEQVSQENFEKGLIYPPFTNIRKISANIAAKVAAKAYELGLATRLPEPANLVAYAESCMY
SPAYRSYR

Transcript Sequence

Gene sequence data has not been registered.